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| Number of classes: | 455 |
|---|---|
| Number of individuals: | 0 |
| Number of properties: | 21 |
| Maximum depth: | 8 |
| Maximum number of children: | 13 |
| Average number of children: | 3 |
| Classes with a single child: | 17 |
| Classes with more than 25 children: | 0 |
| Classes with no definition: | 1 |
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Details
| Acronym | VARIO |
|---|---|
| Visibility | Public |
| Description | Variation Ontology, VariO, is an ontology for standardized, systematic description of effects, consequences and mechanisms of variations. VariO allows unambiguous description of variation effects as well as computerized analyses over databases utilizing the ontology for annotation. VariO is a position specific ontology that can be used to describe effects of variations on DNA, RNA and/or protein level, whatever is appropriate. |
| Status | Production |
| Format | OWL |
| Contact | Mauno Vihinen, mauno.vihinen@med.lu.se |
| Home Page | http://variationontology.org/ |
| Publications Page | http://genome.cshlp.org/content/early/2013/10/25/gr.157495.113.abstract |
| Documentation Page | http://variationontology.org/ |
| Categories | |
| Groups | Rice Data Interoperability working group |
Additional Metadata
| URI | http://purl.obolibrary.org/obo/vario.owl |
|---|---|
| Natural Language | |
| version | 2017-02-06 |
| Release date | 2018-11-10T18:03:29+01:00 |
| known Usage | VariO allows : consistent naming, annotation of variation effects, data integration, comparison of variations and datasets, statistical studies, development of sofware tools. |
| notes | A Variation Ontology |
| endorsed By | RDA WDI (http://ist.blogs.inra.fr/wdi/) |
| has Formality Level | http://w3id.org/nkos/nkostype#ontology |
| Ontology Syntax | http://purl.obolibrary.org/obo/oboformat/spec.html |
| is Of Type | http://omv.ontoware.org/2005/05/ontology#DomainOntology |
| used Ontology Engineering Tool | OBO-Edit 2.3.1 |
| has Prior Version | VARIO/submissions/7 |
| deprecated | false |
| Version IRI | http://purl.obolibrary.org/obo/vario/2017-02-06/vario.owl |
| identifier | http://purl.obolibrary.org/obo/vario.owl |
| is Format Of | http://www.variationontology.org/vario_download/vario.obo |
| endpoint |  |
| URI Lookup Endpoint | http://data.agroportal.lirmm.fr/search?ontologies=VARIO |
| preferred Namespace Prefix | variation_ontology |
| example Identifier | http://purl.obolibrary.org/obo/VariO_0117 |
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Submissions
| Submission | Release Date | Upload Date | Downloads |
|---|---|---|---|
| 2017-02-06 (Parsed, Indexed, Metrics, Annotator) | 11/10/2018 | 11/10/2018 | OWL | CSV | RDF/XML |
| 2017-02-06 (Archived) | 04/27/2018 | 04/27/2018 | OWL |
| 2017-02-06 (Archived) | 01/08/2018 | 01/08/2018 | OWL |
| 2017-02-06 (Archived) | 08/05/2017 | 08/05/2017 | OWL |
| 2017-02-06 (Archived) | 03/07/2017 | 03/07/2017 | OWL |
| 2015-08-20 (Archived) | 02/08/2017 | 02/08/2017 | OBO |
| 2015-08-20 (Archived) | 05/30/2016 | 05/30/2016 | OBO |
| 2015-04-22 (Archived) | 05/01/2015 | 06/23/2015 | OBO |
| more... | |||
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Projects Using This Ontology Create new project
| Project | Description | People | Institution |
|---|---|---|---|
|
VEST-AgroPortal Map of Standards
|
This VEST-AgroPortal provides a global map of existing...
This VEST-AgroPortal provides a global map of existing vocabularies for the exchange of data in the field of food and agriculture. The directory is the result of the merging of records from two different sources: the VEST Registry (a registry of vocabularies of all types and all formats) and the AgroPortal (a repository of ontologies).
|
Valeria Pesce (valeria.pesce@fao.org)
Valeria Pesce (valeria.pesce@fao.org)
|
Food & Agriculture Organization |
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